Resources

Data, accessions and material

Datasets generated by the group are deposited in public archives; accessions are listed here and repeated in the corresponding publications.

Sequencing data

Dataset	Paper	Accession
Deep shotgun metagenomic sequences of the gut microbiome from treatment-naive tuberculosis patients	Yunusbaeva et al., Frontiers in Cellular and Infection Microbiology 2024 — doi:10.3389/fcimb.2024.133152	NCBI BioProject PRJNA1061168

Requests

For genotype or phenotype data that cannot be deposited publicly, for collaboration proposals, or for student projects, write to yunusbb@gmail.com. Please describe the intended use — most requests are answered within a week.

Code

Analysis code is released alongside the corresponding papers. If a specific script or pipeline is not available in a paper's supplement, ask us directly and we will share it.